Foliar bacterial communities of trembling aspen in a common garden.
Identifieur interne : 000179 ( Main/Exploration ); précédent : 000178; suivant : 000180Foliar bacterial communities of trembling aspen in a common garden.
Auteurs : Charles J. Mason [États-Unis] ; Jesse A. Pfammatter ; Liza M. Holeski ; Kenneth F. RaffaSource :
- Canadian journal of microbiology [ 1480-3275 ] ; 2015.
Descripteurs français
- KwdFr :
- ARN ribosomique 16S (génétique), Agriculture (MeSH), Analyse de séquence d'ARN (MeSH), Animaux (MeSH), Arbres (microbiologie), Bactéries (classification), Bactéries (isolement et purification), Feuilles de plante (microbiologie), Génotype (MeSH), Herbivorie (MeSH), Insectes (MeSH), Populus (microbiologie).
- MESH :
- génétique : ARN ribosomique 16S, Bactéries.
- isolement et purification : Bactéries.
- microbiologie : Arbres, Feuilles de plante, Populus.
- Agriculture, Analyse de séquence d'ARN, Animaux, Génotype, Herbivorie, Insectes.
English descriptors
- KwdEn :
- MESH :
- chemical , genetics : RNA, Ribosomal, 16S.
- classification : Bacteria.
- isolation & purification : Bacteria.
- microbiology : Plant Leaves, Populus, Trees.
- Agriculture, Animals, Genotype, Herbivory, Insecta, Sequence Analysis, RNA.
Abstract
Microbial associations with plants are widely distributed and are structured by a number of biotic and physical factors. Among biotic factors, the host plant genotype may be integral to these plant-microbe interactions. Trees in the genus Populus have become models for studies in scaling effects of host plant genetics and in plant-microbe interactions. Using 454 pyrosequencing of the 16S rRNA gene, we assessed the foliar bacterial community of 7 genotypes of mature trembling aspen trees (Populus tremuloides Michx.) grown in a common garden. Trees were selected based on prior analyses showing clonal variation in their concentration of chemicals conferring resistance against insect herbivores. At broad taxonomic designations, the bacterial community of trembling aspen was similar across all plant genotypes. At a finer taxonomic scale, the foliage of these trees varied in their community composition, but there was no distinct pattern to colonization or abundance related to plant genotype. The most abundant operational taxonomic units (OTUs) were classified as Ralstonia, Bradyrhizobium, Pseudomonas, and Brucella. These OTUs varied across the common garden, but there was no significant effect of host plant genotype or spatial position on the abundance of these members. Our results suggest that aspen genotype is less important in the structuring of its foliar bacterial communities than are other, poorly understood processes.
DOI: 10.1139/cjm-2014-0362
PubMed: 25602743
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Among biotic factors, the host plant genotype may be integral to these plant-microbe interactions. Trees in the genus Populus have become models for studies in scaling effects of host plant genetics and in plant-microbe interactions. Using 454 pyrosequencing of the 16S rRNA gene, we assessed the foliar bacterial community of 7 genotypes of mature trembling aspen trees (Populus tremuloides Michx.) grown in a common garden. Trees were selected based on prior analyses showing clonal variation in their concentration of chemicals conferring resistance against insect herbivores. At broad taxonomic designations, the bacterial community of trembling aspen was similar across all plant genotypes. At a finer taxonomic scale, the foliage of these trees varied in their community composition, but there was no distinct pattern to colonization or abundance related to plant genotype. The most abundant operational taxonomic units (OTUs) were classified as Ralstonia, Bradyrhizobium, Pseudomonas, and Brucella. These OTUs varied across the common garden, but there was no significant effect of host plant genotype or spatial position on the abundance of these members. Our results suggest that aspen genotype is less important in the structuring of its foliar bacterial communities than are other, poorly understood processes. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM"><PMID Version="1">25602743</PMID><DateCompleted><Year>2016</Year><Month>01</Month><Day>26</Day></DateCompleted><DateRevised><Year>2018</Year><Month>12</Month><Day>02</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1480-3275</ISSN><JournalIssue CitedMedium="Internet"><Volume>61</Volume><Issue>2</Issue><PubDate><Year>2015</Year><Month>Feb</Month></PubDate></JournalIssue><Title>Canadian journal of microbiology</Title><ISOAbbreviation>Can J Microbiol</ISOAbbreviation></Journal><ArticleTitle>Foliar bacterial communities of trembling aspen in a common garden.</ArticleTitle><Pagination><MedlinePgn>143-9</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1139/cjm-2014-0362</ELocationID><Abstract><AbstractText>Microbial associations with plants are widely distributed and are structured by a number of biotic and physical factors. Among biotic factors, the host plant genotype may be integral to these plant-microbe interactions. Trees in the genus Populus have become models for studies in scaling effects of host plant genetics and in plant-microbe interactions. Using 454 pyrosequencing of the 16S rRNA gene, we assessed the foliar bacterial community of 7 genotypes of mature trembling aspen trees (Populus tremuloides Michx.) grown in a common garden. Trees were selected based on prior analyses showing clonal variation in their concentration of chemicals conferring resistance against insect herbivores. At broad taxonomic designations, the bacterial community of trembling aspen was similar across all plant genotypes. At a finer taxonomic scale, the foliage of these trees varied in their community composition, but there was no distinct pattern to colonization or abundance related to plant genotype. The most abundant operational taxonomic units (OTUs) were classified as Ralstonia, Bradyrhizobium, Pseudomonas, and Brucella. These OTUs varied across the common garden, but there was no significant effect of host plant genotype or spatial position on the abundance of these members. 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Holeski</name><name sortKey="Pfammatter, Jesse A" sort="Pfammatter, Jesse A" uniqKey="Pfammatter J" first="Jesse A" last="Pfammatter">Jesse A. Pfammatter</name><name sortKey="Raffa, Kenneth F" sort="Raffa, Kenneth F" uniqKey="Raffa K" first="Kenneth F" last="Raffa">Kenneth F. Raffa</name></noCountry><country name="États-Unis"><region name="Wisconsin"><name sortKey="Mason, Charles J" sort="Mason, Charles J" uniqKey="Mason C" first="Charles J" last="Mason">Charles J. Mason</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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